Question: (Closed) Aligning two sequences in MUMmer
0
gravatar for Helena
23 months ago by
Helena0
Helena0 wrote:

Hi,

I want to align two sequences in MUMmer. Is ./mummer -mum 1.fasta 2.fasta the way to go ?

Thank you!

ADD COMMENTlink modified 23 months ago by Joe18k • written 23 months ago by Helena0

Have you tried it?

ADD REPLYlink written 23 months ago by Joe18k

Read all of https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1002202, with special attention to rule #6.

ADD REPLYlink written 23 months ago by RamRS30k

Hello Helena!

Read and apply the manual (http://mummer.sourceforge.net/manual/)

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink modified 23 months ago • written 23 months ago by ATpoint41k
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