JBrowse Error : HTTP 200 when fetching file
4
1
Entering edit mode
3.4 years ago

I'am trying to open index.html from JBrowse after running ./setup.sh. I have just loaded sample_data of volvox. But some of the tracks are not loading file. Showing "Error : HTTP 200 when fetching file"

Please help me in this Thank You.!

Screenshot : https://photos.app.goo.gl/NQsa5SJC5w7APfHk8

jbrowse http 200 flask • 1.3k views
ADD COMMENT
1
Entering edit mode

Tagging: cmdcolin

ADD REPLY
3
Entering edit mode
3.4 years ago
colindaven ★ 3.8k

The setup data should work, however, it looks like you are trying to run it on your local client machine using the file:/// protocol in the browser?

If that is true, try using the JBrowse-1.16.1-desktop-linux-x64.zip from the following site, it is likely more appropriate to your needs.

http://jbrowse.org/blog/

I use JBrowse on a server only, but the local version is attractive for some colleagues.

ADD COMMENT
2
Entering edit mode

+1 for this. You need to setup a web server, you cannot just double click index.html in your file explorer and have it work even if it appears to work for some very limited cases http://jbrowse.org/docs/faq.html#what-webserver-is-needed-for-jbrowse

And indeed, the desktop version is a good option also

ADD REPLY
2
Entering edit mode
3.4 years ago
rajesh ▴ 60

First run perl bin/flatfile-to-json.pl programme with features and then run run generatename.pl. program Only after this results are displayed.

ADD COMMENT
2
Entering edit mode
3.4 years ago

Thank you everyone..

Actually i wanted to implement browse in Flask framework, and by just adding "JBrowse" folder in static directory of my app solved this problem.

Thanks again for your valuable responses.

ADD COMMENT

Login before adding your answer.

Traffic: 2526 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6