I am using cuffdiff command from cufflinks pipeline to find the genes that are differentially expressed between case and control samples. I have got several files outputted from cuffdiff. I would like to have the standard deviation of FPKM values of samples. I am not sure which file and column I should be looking at. I checked the gene_diff.exp file but I cannot find the information about standard deviation of FPKM values.
Does anyone know how can I get this information?