Question: How to download the .dat file of the UniProt Metazoa?
1
gravatar for Seq225
9 days ago by
Seq22580
Seq22580 wrote:

Hi,

I need the .dat file for the UniProt Metazoa. .dat has the EMBL format, which I need. But I don't see it here: https://www.uniprot.org/taxonomy/33208#

I can download the clade specific .dat files from here: https://www.uniprot.org/downloads. But I don't see the metazoan .dat file here.

Cab anybody help?

Cheers!!

ADD COMMENTlink modified 9 days ago by vkkodali860 • written 9 days ago by Seq22580

The UniProt flat file format is not the same as the EMBL format even if it is quite close. So you might run into issues if your software expects real EMBL.

ADD REPLYlink written 8 days ago by me690

Thank you very much.

ADD REPLYlink written 8 days ago by Seq22580
3
gravatar for vkkodali
9 days ago by
vkkodali860
United States
vkkodali860 wrote:

Go to this page: https://www.uniprot.org/uniprot/?query=reviewed:yes%20taxonomy:33208 and click on the Download button. If you choose Text from the drop-down list for Format, you will get the data in EMBL format.

ADD COMMENTlink written 9 days ago by vkkodali860

Thanks. That is what I did and it worked!

ADD REPLYlink written 8 days ago by Seq22580

Would you please answer my another question (if you know the answer) here? Protist in UniProt/NCBI taxonomic tree

Thanks!

ADD REPLYlink written 7 days ago by Seq22580

Don't forget to follow up on your threads.

Seq225 : If an answer was helpful, you should upvote it; if the answer resolved your question, you should mark it as accepted. You can accept more than one if they work.
Upvote|Bookmark|Accept

Please do the same for your previous posts as well.

ADD REPLYlink written 7 days ago by genomax60k

Thank you very much. Done!

ADD REPLYlink written 7 days ago by Seq22580
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