Question: GATK Best Practices on Google Cloud
0
gravatar for gdaly9000
12 months ago by
gdaly900010
gdaly900010 wrote:

Does anyone have experience actually running the GATK best practices on Google Cloud?

Even following their protocol exactly as defined here (https://cloud.google.com/genomics/docs/tutorials/gatk) and using the provided test dataset, the workflow consistently fails.

I was hoping to see if anyone has had success with the workflow, before I start doing more major debugging (error messages have been inconsistent, making the task non-trivial).

alignment • 365 views
ADD COMMENTlink written 12 months ago by gdaly900010
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1562 users visited in the last hour