Perturbation Cancer cell line data

Question

[jmannhei]

Hi all,

I was wondering if anybody new of a database of perturbation experiments in cancer cell lines where there are pre and post treatment RNA-SEQ or microarray data. I looking for particularly for Methotrexate, Vinblastine, Vorinostat, Cisplatin, and Gemcitabine. Thanks

[GenoMax]

Try: https://ewels.github.io/sra-explorer/ Use a combination of keywords to browse SRA datasets.

Answer 1

[Pappu]

You can find it at https://clue.io/

[GenoMax]

The link looked suspicious but it does actually point to Connectivity Map (perturbation-driven gene expression dataset) hosted at Broad Institute (at least at this time).