Question: juicer.sh problem !
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dimitrischat • 90 wrote:
Trying to run sample files from here: https://github.com/aidenlab/juicer/wiki/Installation , but it returns this problem:
(-: /home/app/Desktop/apps/Juicer/scripts/splits/HIC003_S2_L001_001.fastq.gz.sam created successfully.
awk: /home/app/Desktop/apps/Juicer//scripts/common/chimeric_blacklist.awk: line 503: function and never defined
awk: /home/app/Desktop/apps/Juicer//scripts/common/chimeric_blacklist.awk: line 503: function and never defined
awk: /home/app/Desktop/apps/Juicer//scripts/common/chimeric_blacklist.awk: line 503: function and never defined
awk: /home/app/Desktop/apps/Juicer//scripts/common/chimeric_blacklist.awk: line 503: function and never defined
awk: /home/app/Desktop/apps/Juicer//scripts/common/chimeric_blacklist.awk: line 503: function and never defined
***! Failure during chimera handling of /home/app/Desktop/apps/Juicer/scripts/splits/HIC003_S2_L001_001.fastq.gz
Any ideas?
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modified 9 months ago
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Biostar ♦♦ 20
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written
10 months ago by
dimitrischat • 90
