Bowtie2 filter by alignment score
0
0
Entering edit mode
5.2 years ago
biogirl04 ▴ 10

Hi,

Is there a way I can get only reads with an alignment score of greater than -5 in bowtie2 alignment?

Thanks!
RNA-Seq SNP next-gen alignment gene • 980 views
ADD COMMENT •
0
Entering edit mode

Are you referring to MAPQ?

ADD REPLY •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 2565 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6