Question: How to build a phylogenetic tree (breast cancer samples)
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gravatar for Pin.Bioinf
3 months ago by
Pin.Bioinf240
Malaga
Pin.Bioinf240 wrote:

I would like to build a phylogenetic tree for around 40-50 patients with breast cancer based on SNP and CNAs I was asked for it by a fellow biologist, I am completely new to phylogenetics and I have no clue where to start. Do you have any recommendations on pipelines or brief steps I should follow as well as any good tools?

Thank you

ADD COMMENTlink written 3 months ago by Pin.Bioinf240

For hierarchical clustering, you can use hclust in R. Here some examples in a tutorial.

ADD REPLYlink modified 3 months ago • written 3 months ago by Benn6.8k
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