Question: How to build a phylogenetic tree (breast cancer samples)
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gravatar for Pin.Bioinf
16 months ago by
Pin.Bioinf270
Malaga
Pin.Bioinf270 wrote:

I would like to build a phylogenetic tree for around 40-50 patients with breast cancer based on SNP and CNAs I was asked for it by a fellow biologist, I am completely new to phylogenetics and I have no clue where to start. Do you have any recommendations on pipelines or brief steps I should follow as well as any good tools?

Thank you

ADD COMMENTlink written 16 months ago by Pin.Bioinf270

For hierarchical clustering, you can use hclust in R. Here some examples in a tutorial.

ADD REPLYlink modified 16 months ago • written 16 months ago by Benn8.0k
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