I would like to ask whether is possible to do more general annotation of my VCF files? I mean, snpEff produces annotation like intragenic_variant, splicing_variant, non coding transcript_variant which are not common e.g in VEP. I would like to get more general annotation - UTR, exon, intergenic, intron and so on. I do not know how to handle with e.g. intragenic variant. Can I group it with exon_variant? In VEP everything is more general, but I could not use VEP because of other version of genome, so I have to use snpEff.