Entering edit mode
5.1 years ago
mireiya.ryo
•
0
Hi. I'm student of graduate school of Japan.
I'm assembling genome of Angiosperms by using DDBJ Super computer system.
I chose " platanus " for assembling software, but I have in trouble of ERROR.
Error(1): File not open exception!!
/home/silv-higuchi/platanus_assemble/test_1.fq
is not open!!
command is as follows.
./platanus assemble -f /home/silv-higuchi/platanus_assemble/test_1.fq
/home/silv-higuchi/platanus_assemble/test_2.fq
/home/silv-higuchi/platanus_assemble/test2_1.fq
/home/silv-higuchi/platanus_assemble/test2_2.fq
/home/silv-higuchi/platanus_assemble/test3_1.fq
/home/silv-higuchi/platanus_assemble/test3_2.fq
Anyone has good idea? Please help.
Are you translating the error message from a different language? Can you check if you have read access to the
test1.fq
file?