Question: NCBI Genome Data Viewer help
0
gravatar for daniel.naumovas
6 months ago by
daniel.naumovas0 wrote:

Hey guys, can somebody help me to identify what these colors on ideogram mean (picture included).

Genome Data Viewer

There are Genome Data Viewer legends, but they do not tell anything about these colours (example: pink in upper ideogram or orange/greenin other one).

Thank You.

-DN!

genome • 315 views
ADD COMMENTlink modified 6 months ago by RamRS23k • written 6 months ago by daniel.naumovas0
1

Hello, please see How to add images to a Biostars post

Plus, your link is dead

ADD REPLYlink written 6 months ago by Bastien Hervé4.4k

Color codes for the graphical views are described on this help page. Pink region is the centromere.

ADD REPLYlink written 6 months ago by genomax70k

I have checked these legends but there is no information about colours that i ask. That pink is centromere is known from basic knowladge but others are still unknown, atleast for me.

ADD REPLYlink written 6 months ago by daniel.naumovas0
1

I don't have a great monitor so the colors look a bit off but at least the orange one is likely for segmental duplication. A quick email to NCBI help desk should generate a response in 2-3 working days.

ADD REPLYlink modified 6 months ago • written 6 months ago by genomax70k
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