Hi all, I am a bioinformatics newbie slightly constrained with time and need to quickly test an established scaffolding pipeline, bionano-solve using a small assembly dataset. Upon reading the documentation the pipeline was validated with NA12878 of the human genome. I was wondering if there are smaller benchmarks for which I can use its assembly to test the pipeline, please?
Thank you very much for your generous support.
There is a reference is to
bionano-solve
so this would likely be Bionano Genomics data. This technology is based on optical mapping and not sequencing.