Does anyone know how to get the SNP information containing CHR ID A1 REF etc with association test on quantitative trait from plink (output file: .qassoc). I done the association test and I want to obtain these information also. In --linear with plink2, I have it, but with plink1.9 association with quantitative trait, I don't have that information (--assoc in plink1.9 runs a lot faster than --linear in plink2 without covariates while --linear with in plink2 gives me memory error:
Error: Out of memory. The --memory flag may be helpful).
I understand that I can use the .bim file, but having integrated information would be very helpful.
Your help is really appreciated!