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Question: meaning of Q_bias ADMIXTURE bootstrap
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gravatar for samuelandjw
2.0 years ago by
samuelandjw • 40
samuelandjw • 40 wrote:

I'm referring to the software ADMIXTURE by DH Alexander. I want to use -B option of ADMIXTURE 1.3.0 to calculate confidence intervals for admixture proportions. The results include a .Q_se file (I assume “se” stands for standard error) and .Q_bias. However, I cannot find the meaning of .Q_bias in all three papers on ADMIXTURE or the latest software manual.

What is the meaning of .Q_bias?

Thanks!
admixture population ancestry • 692 views
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modified 18 months ago by icrojasb • 0 • written 2.0 years ago by samuelandjw • 40
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gravatar for icrojasb
18 months ago by
icrojasb • 0
icrojasb • 0 wrote:

Hi Samuel,

Did you figure out how to interpret the Q_bias file? I ran admixture with the bootstrap option but it is not clear to me how to interpret this output to choose the best K.

Thanks,
ADD COMMENT • link written 18 months ago by icrojasb • 0

No. I haven't figured it out yet.

ADD REPLY • link written 18 months ago by samuelandjw • 40
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