Question: meaning of Q_bias ADMIXTURE bootstrap
gravatar for samuelandjw
2.0 years ago by
samuelandjw40 wrote:

I'm referring to the software ADMIXTURE by DH Alexander. I want to use -B option of ADMIXTURE 1.3.0 to calculate confidence intervals for admixture proportions. The results include a .Q_se file (I assume “se” stands for standard error) and .Q_bias. However, I cannot find the meaning of .Q_bias in all three papers on ADMIXTURE or the latest software manual.

What is the meaning of .Q_bias?


admixture population ancestry • 692 views
ADD COMMENTlink modified 18 months ago by icrojasb0 • written 2.0 years ago by samuelandjw40
gravatar for icrojasb
18 months ago by
icrojasb0 wrote:

Hi Samuel,

Did you figure out how to interpret the Q_bias file? I ran admixture with the bootstrap option but it is not clear to me how to interpret this output to choose the best K.


ADD COMMENTlink written 18 months ago by icrojasb0

No. I haven't figured it out yet.

ADD REPLYlink written 18 months ago by samuelandjw40
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