Question: How to Caculate the input-subtract signal for a specific enhancer region
0
gravatar for biofandd
2.0 years ago by
biofandd0
biofandd0 wrote:

Hi,all. I'm a tiro for ChIP-Seq, Now, I want to compare ChIP-Seq signal between two conditions, and therefore I plan to caculate the input-subtracted signal for each enhancer region to yield reads per kilobase per million (RPKM). How to get the RPKM info based on the bed file of enhancer peaks and signal bigwig?

ADD COMMENTlink written 2.0 years ago by biofandd0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2141 users visited in the last hour
_