Demultiplex nanopore reads with custom barcodes

Question

[materanv96]

We have a problem trying to demultiplex MinION sequences with custom barcodes. Do you have any software recommendations we can try for demultiplexing or how to demultiplex these custom barcodes with Albacore? We have tried using albacore but it only recognizes barcodes provided by Nanopore Technologies.

[gb]

If it are just fasta or fastq files you could use cutadapt or sabre I think