I have been trying to run sma3s for protein annotation, according to the author's instructions (UPOBioinfo Group). However, when running the command
./sma3s.pl -i query_dataset.fasta -d uniref90.fasta -goslim
I got the message "Problem with blastdbcmd. It could be due to an empty or erroneous Blast report file, indexed fasta, or low RAM memory". When I check the files in the folder, the uniref90.fasta file has been emptied.
Does anyone know how to solve it?
Thanks in regard,