Question: Ensembl ID found on the site but not in downloaded flat file
0
gravatar for Chat-ra
6 weeks ago by
Chat-ra20
Chat-ra20 wrote:

Hello everyone!

I’ve downloaded several Ensembl file (the entrez and uniprot ones) found here: http://ftp.ensembl.org/pub/release-95/tsv/homo_sapiens/ While working I’ve encountered an issue. Some of the Ensembl gene ID are available on the web site but I can’t find them in the downloaded files.

For example:

ENSG00000169668 ( https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169668;r=22:21103016-21122285 )

ENSG00000237276 ( http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000237276;r=1:16215909-16228027 )

Is there someone who can help me figure out what is happening? Thank you for any suggestions!!!

entrez uniprot ensembl genome • 162 views
ADD COMMENTlink modified 6 weeks ago by Devon Ryan89k • written 6 weeks ago by Chat-ra20
3
gravatar for Emily_Ensembl
6 weeks ago by
Emily_Ensembl18k
EMBL-EBI
Emily_Ensembl18k wrote:

These IDs are not in the files because the files map between Ensembl identifiers and other databases. These IDs have no match in these databases.

ADD COMMENTlink written 6 weeks ago by Emily_Ensembl18k

Okey !! Thank you !!

ADD REPLYlink written 6 weeks ago by Chat-ra20
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