Question: (Closed) extratcting gene names
0
gravatar for venkatarao142152
6 months ago by
venkatarao1421520 wrote:

where I have extracted 300 abstracts from pubmed related to lung cancer using Bio python package. now my requirement is from these abstracts I need to extract gene names which are included in the abstracts. is it possible to do. if yes how may I know the procedure.

R pubmed web scraping python • 141 views
ADD COMMENTlink written 6 months ago by venkatarao1421520

What happened in your previous thread, dude? - extracting gene names

Did you try the suggestions?

ADD REPLYlink written 6 months ago by Kevin Blighe48k

previous threads are not relevant to my queries. I have extracted all abstracts now I need to extract gene names form that abstracts using regular expressions. if is there any other process also to extract gene names I am eagerly waiting to get reply form yours

ADD REPLYlink written 6 months ago by venkatarao1421520

Perhaps should look in the area of NLP (Natural Language Processing).

ADD REPLYlink written 6 months ago by Kevin Blighe48k

Hello venkatarao142152!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

ADD REPLYlink written 6 months ago by genomax71k
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