Question: local galaxy error
0
gravatar for arraychip
7 days ago by
arraychip30
arraychip30 wrote:

HI I have been using local galaxy on Mac Book Pro without problem.

But the latest installation is giving me problems

My initial installation is OK when sh run.sh is run after download. It opens galaxy on a web browser OK. When I added e-mail address to the galaxy.yml for admin and restart, I get the following error message. And I don't know what these means. Any advice would be appreciated.


Traceback (most recent call last):

  File "<string>", line 1, in <module>

  File "/Users/ysh/galaxy/lib/galaxy/dependencies/__init__.py", line 155, in optional
    conditional = ConditionalDependencies(config_file)

  File "/Users/ysh/galaxy/lib/galaxy/dependencies/__init__.py", line 29, in __init__
    self.parse_configs()

  File "/Users/ysh/galaxy/lib/galaxy/dependencies/__init__.py", line 33, in parse_configs
    self.config = load_app_properties(config_file=self.config_file)

  File "/Users/ysh/galaxy/lib/galaxy/util/properties.py", line 94, in load_app_properties
    properties.update(raw_properties.get(config_section) or {})

ValueError: dictionary update sequence element #0 has length 1; 2 is required
galaxy • 55 views
ADD COMMENTlink modified 7 days ago by h.mon24k • written 7 days ago by arraychip30

You'll need to post the relevant line from galaxy.yml. Also, you probably want https://help.galaxyproject.org/

ADD REPLYlink written 7 days ago by Devon Ryan88k
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