RNAseq data anti-pd1 treatment
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2.6 years ago
guillaume.rbt ▴ 920

Hi all,

I'm currently gathering cancer RNAseq data, looking for public dataset of patients treated with anti-pd1 immunotherapy. I was wondering in which public database I was more likely to find this type of sequencing data.

Thanks

RNA-Seq immunotherapy meta-analysis • 1.3k views
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2.6 years ago

On NCBI BioProject you can find some

https://www.ncbi.nlm.nih.gov/bioproject/PRJEB23709

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Great dataset.

Is there any way to download the expression matrix(counts) for PRJEB23709 directly, or we have to download the raw SRA data to process them by using LINUX ?

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You will have to reprocess

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