Structure produces no result
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2.8 years ago
rimgubaev ▴ 270

If I run structure on my data (288 individuals, 8251 loci) it produces zero output. I also tried to replace "/" with "," as suggested here but still, it did not help.

When I try to run It on provided sample_data (200 individuals, 5 loci) structure does not upload the data and outputs the following error: "Bad Format in Data Source: Data entries are more than expected (7) at line 1". The number of individuals is specified in sample_parameters file and when I try to change the number of loci I still get the same error.

The version I use is 2.3.4

Structure Population genetics • 647 views
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Just tried to run the same task on 2.3.1. As a result I got absolutely the same problems.

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Can you provide an overview of how you processed your data? Questions on Structure are not common here. You may also consider contacting the developers directly.

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I now use Plink+ADMIXTURE to make population structure barplot, it works fine. Maybe sometime I'll back to structure and contact developers directly.

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