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5.1 years ago
rimgubaev
▴
330
If I run structure on my data (288 individuals, 8251 loci) it produces zero output. I also tried to replace "/" with "," as suggested here but still, it did not help.
When I try to run It on provided sample_data (200 individuals, 5 loci) structure does not upload the data and outputs the following error: "Bad Format in Data Source: Data entries are more than expected (7) at line 1". The number of individuals is specified in sample_parameters file and when I try to change the number of loci I still get the same error.
The version I use is 2.3.4
Just tried to run the same task on 2.3.1. As a result I got absolutely the same problems.
Can you provide an overview of how you processed your data? Questions on Structure are not common here. You may also consider contacting the developers directly.
I now use Plink+ADMIXTURE to make population structure barplot, it works fine. Maybe sometime I'll back to structure and contact developers directly.