I am doing RNA-seq analysis and it seems that the quality of my reads is not desirable.
Below is a typical fastqc report for my data.
I have read many tutorial about fastqc, from my understanding, it seems that the 1-10 bp are adaptor sequences. But in the adaptor content section, there is no waining.
- I am wandering if my understanding is right?
- Should I use trimmomatic to cut adaptor sequences?