table to convert RS names to CHR-POS-REF-ALT (es GnomAD)
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5.1 years ago
cocchi.e89 ▴ 270

Dear all,

is there a table to convert (SNV and INDELs) rs names into CHR-POS-REF-ALT format?

Thanks a lot in advance for any help!

rs variant names nomeclature gnomad • 3.8k views
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What exact input data do you have, currently? - just a vector or list (in a file) of rs IDs?

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Thanks for reply. Just several rsIDs (I can create a file or a list if matters)

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Please take a look at the answer by ATpoint. where at least 2 solutions can be found.

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5.1 years ago
ATpoint 81k

This has been asked before, please see:

Search dbSNP for hg19 based coordinates

SNP rs ID batch query

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