Hi, I downloaded FASTQ files from here . Both the files are in the read files tab of the page. I'm confused with the number of files given and unable to say which file belongs to Read 1 & 2. As the library layout is "PAIRED", should I consider File1 as Read 1 and File 2 as Read 2 or should I check the header of each of the FASTQ files? If latter is the case then File1 : @SRR3929874.1 1/1 File2: @SRR3929874.1 1/2
Or is there any other command to check if the FASTQ file is single end or paired end?
Thanks in advance.
Thanks for your reply.