Hello, I have a many of SNP from SNPchimp base, and for example, in two files I have the same rs number, with the same position and same chromosome, but another ss.
Example: (chip_name, rs,ss,allels,orient, allels1, allels2, chromosome, positionOnChromosome)
Bov_IDBv2 rs17871566 ss28451907 A/G forward A/G A/G 1 138583183
Bov_IlluHD rs17871566 ss251326633 A/G forward A/G A/G 1 138583183
I have to be sure that rs are the same, and this is not just a mistake. So I would like to check if both "ss" refer to the same "rs". Where can I check it? dbSNP worked before but now it's only for human snps (?) in my case its cow SNPs, but now it does not search for "ss". Can anyone help?