Question: samtools sort: truncated file. Aborting
0
m.t.lorenc • 0 wrote:
Hi, I got an error by using this the below command:
samtools sort -O SAM -n -@ 2 -o OZBenth2_.fastp.fq.gz.name-sorted.sam OZBenth2_.fastp.fq.gz.sam
[W::sam_read1] Parse error at line 1
samtools sort: truncated file. Aborting
What did I miss?
Thank you in advance,