Question: RepeatModeler nseg installation problem
0
gravatar for Amaranta_Remedios
10 months ago by
The university of Manchester, UK
Amaranta_Remedios0 wrote:

Hi,

I am trying to install nseg in my computer so I can use RepeatModeler but this is not working. I have a folder called nseg in my computer with 7 files in it: genwin.c genwin.h lnfac.h makefile nmerge.c nseg.c runnseg When I typed make the result is:

....... 36 warnings and 11 errors generated

Any idea how to solve this ? Thanks

ADD COMMENTlink modified 9 months ago by 96clbutler0 • written 10 months ago by Amaranta_Remedios0

a similar question was asked and never solved in A: Alternatives to RepeatModeler / nseg install fail

ADD REPLYlink written 10 months ago by Amaranta_Remedios0

also no response on GitHub https://github.com/rmhubley/RepeatModeler/issues/32

ADD REPLYlink modified 10 months ago • written 10 months ago by Amaranta_Remedios0

I also have the same problem - so frustrating as so little online documentation. Any luck getting this issue sorted?

ADD REPLYlink written 9 months ago by 96clbutler0

I think I have a hackaround working: https://github.com/ScientistJake/nseg_osx

ADD REPLYlink written 8 months ago by Jake Warner800

I can compile nseg on a Debian Linux with GCC version 8.3.0 - there are lots of warnings, but no errors.

Please tell which is your operating system and the compiler and its version. More important, use pastebin or some other similar forum to post the error messages and post the link here.

ADD REPLYlink written 9 months ago by h.mon29k

Here's the errors:
https://pastebin.com/LfsaNdmF

All the errors relate to non-void functions.

ADD REPLYlink written 8 months ago by Jake Warner800

I'm facing the same error have you figured this out?

ADD REPLYlink written 5 months ago by ohon.kin0
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