Question: Batch download of bed files for all transcription factors associated with a cell type
0
gravatar for User 7754
9 months ago by
User 7754230
United Kingdom
User 7754230 wrote:

Hi,

Are there any web tools for downloading all TF related ChiPSeq experiments in a particular cell type in batch without going through each dataset in ENCODE or in Cistrome db?

Thank you

ADD COMMENTlink modified 9 months ago by ATpoint28k • written 9 months ago by User 7754230
2
gravatar for ATpoint
9 months ago by
ATpoint28k
Germany
ATpoint28k wrote:

You can try to get the ReMap2018 files and then filter for the cell types you want.

ADD COMMENTlink written 9 months ago by ATpoint28k

I didn't know about this resource, thank you!

ADD REPLYlink written 9 months ago by User 7754230

Glad to help :)

ADD REPLYlink written 9 months ago by ATpoint28k
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