I am a bioinformatics student and currently having a genome annotation task which I don't know how to approach therefore I need your help.
I have to annotate yeast genome S. japonicus and I have the following files:
- Contigs file (fasta) for the mentioned yeast.
- Predicted coding sequences and proteins (fasta format each) using Augustus software where S. pombe was model species.
- gff file for predicted genes.
I think that half of the job has been done by the prediction but I still have no clue how to annotate the genome.
Thanks in advance,