Question: How to Simulate RNA-Seq data with allelic bias
gravatar for Giovanni Quinones Valdez
10 weeks ago by

Hello everyone,

I am trying to simulate RNA-Seq reads to test some software. I want some of the genes to exhibit allele-specific expression, meaning to have one gene allele expressed more than the other. Is there a software that does such simulations?


PD. Also, if anyone knows of any software that also simulates RNA editing sites it would be great.

rna-seq next-gen simulation • 140 views
ADD COMMENTlink written 10 weeks ago by Giovanni Quinones Valdez0

If you're familiar with R this could be of value:

ADD REPLYlink written 10 weeks ago by nsmi8446120
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1724 users visited in the last hour