Entering edit mode
5.0 years ago
kani.kanchan
▴
10
Hi All
I want to compare the counts of concordant and discordant genotypes out of a total SNPs between paired samples. I tried using PLINK merge-mode 7 option but my diff files returns to be empty and I get this message in the log file-
0 overlapping calls, 0 nonmissing in both filesets.
0 concordant, for a concordance rate of -nan.
Could someone please help me to accomplish my task?
Thanks, Kanika
