How to use multiple control in Control-FREEC for CNV analysis?
0
0
Entering edit mode
2.5 years ago
BioNoobie ▴ 10

We have 15 control sample and 30 test sample and want to check copy number variation in test samples. The sequencing method used is ion-torrent PGM,

A region in a chromosome is targeted and the whole region is sequenced including intron and intergenic region.

Which tool is best to identify CNV in the samples?

Control-FREEC is one of the methods we found useful but the control sample are not matched normal, can we use multiple control in FREEC?

targeted gene sequencing FREEC Control-FREEC cnv • 744 views
ADD COMMENT

Login before adding your answer.

Traffic: 2703 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6