Entering edit mode
5.4 years ago
nazaninhoseinkhan
▴
530
Dear all,
I need to convert case_ids of TCGA data to file_ids.
I used TCGAutils but I could not convert the IDs
Can you advice me how to do this?
Regards
Nazanin
Hi Using "GenomicDataCommon" package in R, you will be able to find corresponding TCGA barcodes of the folder names. Then using "Manifest" file of your data, you will be able to find corresponding file names.