I need to convert case_ids of TCGA data to file_ids.
I used TCGAutils but I could not convert the IDs
Can you advice me how to do this?
Hi, where you able to find a solution to this questions as I am in the same shoe?
Using "GenomicDataCommon" package in R, you will be able to find corresponding TCGA barcodes of the folder names. Then using "Manifest" file of your data, you will be able to find corresponding file names.
Thanks a lot
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