I'd like to visualize a network / relationships between two types of data(transcriptome data vs promote data)
The network() function (Relevance Network) of the mixOmics R package suggests to save results as the graph object that can be used by Cytoscape to improve visualization. I've check the Cytoscape Apps, and couldn't find any relevant plug-ins.
Omics Visualizer - is not relevant to this task.
OmicsAnalyzer - doesn't have valid instructions (The requested URL /~jlv/omicsanalyzer/OmicsAnalyzer_Tutorial_Data_Import.pdf was not found on this server.)
Just wondering if there is a Cytoscape plug-ins that helps to improve visualization generated by mixOmics (R)? Or maybe any other way of visualizing multi omics datasets generated by mixOmics ?
Would appreciate any suggestions.