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• Why annotations are not encoded using standard informatic format ?
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  hi! I have dwnloaaded files regarding breast cancer genome transcription with the following pytho...
• VEP JSON output parsing
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• Download all SRA of one species
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• Conventions for sorting provenance (original URL, processing steps) in VCF file
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• Querying VEP using REST API
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• VCF annotations -> readable info using PyVCF?
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• Samtools: Why Have I Been Using "View" Command For Mpileup
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• Create a File format to store Variant
  Hi, BED format or VCF format are not well designed to store [hgvs][1] notation and metadatas of ...
• How To Specify Positional Argument Order In A Gkno Tool
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• Should We Be Using Much More Json In Our Delimited Data Formats?
  Many bioinformatic files are delimited because delimited files are so useful for manipulation and...
• Sorting samtools output by flag or grepping its tags
  Hi! I am getting confused with couple samtools outputs. I have run bwa-mem with -M flag to retri...
• Obtaining input matrix from Kallisto for later downstream analysis with Deseq2 or EdgeR.
  Dear All! I am very new to bioinformatics and trying to connect phenotype of certain cells with...
• Help with Python script
  Dear all, I am trying to use a program called phyphy. This program runs into python. I would like...