Question: GSM records without a corresponding SRA
0
gravatar for Sammy
11 months ago by
Sammy10
Sammy10 wrote:

Hey,

By your knowledge, is there possible for GSM records to not have a corresponding SRA page?

rna-seq • 193 views
ADD COMMENTlink written 11 months ago by Sammy10

could be. GSM provides sample details, and it could be possible that there are only final processed files rather than the raw data. What is your specific concern?

ADD REPLYlink written 11 months ago by Santosh Anand5.1k

No, there are raw data available in the GSM. I am looking for RNA-seq from the 3rd party to process. Sometimes the SRP series is not as easy to find but I get it most of the times. The thing is that I upload the samples directly into Galaxy with the SRP. I don't really know what to do just with the GSM.

I mean with the GSM I can only download them and then align them?

ADD REPLYlink written 11 months ago by Sammy10
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1474 users visited in the last hour