Question: Mira assembler with IonTorrent unpaired reads
0
gravatar for gustavojorge080
9 months ago by
gustavojorge0800 wrote:

Hello everyone!

I am new to the world of assembling genomes and would like to run the Mira with IonTorrent unpaired reads. But assembly results in empty files.

The first step is to create a manifest file and then run:

mira manifest.conf> & log_assembly.txt

Below is the manifest file:

"project = MyFirstAssembly job = genome,denovo,accurate

readgroup = SomeUnpairedIonReadsIGotFromTheLab data = ../../assemblies/1sttrial/Coryne_1M.fastq technology = iontor"

Where is the error?

ADD COMMENTlink written 9 months ago by gustavojorge0800
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1874 users visited in the last hour