How to edit signalp program like git hub ?
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4.8 years ago
takoyaki ▴ 120

Hi, everyone. Now, I am trying to run SignalP 5 in linux.

Before running signalp, we have to edit some point in signalp program.

According to Trinotate's github, we have to edit two point of my $MAX_ALLOWED_ENTRIES & $ENV{SIGNALP} . This is the URL of Trinotate's github, so please check.

https://github.com/Trinotate/Trinotate.github.io/wiki/Software-installation-and-data-required

However, file named signalp ( this is the file that we run ) is binary file, and I couldn't edit by vim.

Does anyone know how to edit signalp program like that trinotate URL ?

Thank you so much.

RNA-Seq software error alignment next-gen gene • 1.3k views
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4.8 years ago

You mention signalP 5, they are talking about signalP 4.1.

Maybe the file you need is only present in signalP 4.1 ?

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I could solve this problem by downgrading signalP from 5 to 4.1. Thank you so much !

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