I've been working with several RNA-seq data sets in zebrafish, and I largely use STAR for my alignments. For that, I have a full genome fasta file and a gtf. Simple enough. however, I would like to try using SALMON, and it requires a transcriptome file to build its index. I found what I thought was a zebrafish transcriptome file from UCSC, however, SALMON is running into errors building an index with it. It seems to think what I've given it is actually a genome not a transcriptome. I've looked on Ensembl, and I cannoth find a transcriptome file at all.
Does anyone know where I can find a transcriptome file for Zebrafish? Thanks!