I'm trying to set up some files to call Super Enhancers using ROSE. I think I have everything I need, however my BAM files may not be formatted properly. using samtools idxstats I realized that the BAM file I'm using lists chromosomes with their numbers (IE: "1") rather than a "chr 1" format which is needed for ROSE. Any idea how I can convert this BAM file to change the chr identifiers? Thanks for any help you can provide!