Question: How to create a mutation landscape from a VCF file?
1
gravatar for gprashant17
6 months ago by
gprashant1770
gprashant1770 wrote:

I have a VCF file which I have obtained from an aligned BAM file, and I want to identify somatic mutations. I would like to create a mutation landscape so that I can easily compare with databases like dbSNP, COSMIC, etc.

Is there a way to do this? Or is there any other way I can use my VCF file to compare with publicly available mutation datasets?

rna-seq snp genome vcf • 223 views
ADD COMMENTlink written 6 months ago by gprashant1770

What's a mutation landscape?

ADD REPLYlink written 6 months ago by WouterDeCoster42k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 779 users visited in the last hour