Question: how to test for significant phenotype enrichment in phylogenetic tree clusters
gravatar for mikeb
18 months ago by
mikeb0 wrote:

I have a phylogenetic tree with strains grouped into specific clusters/lineages. Strains are assigned to phenotypes A and B. How can I test in which clusters strains of phenotype A are significantly enriched? Is a simple chi-square test valid?

ADD COMMENTlink written 18 months ago by mikeb0
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1542 users visited in the last hour