Tool: Phanantasus: a web-application for exploratory gene expression analysis and visualization
gravatar for alserg
4 months ago by
alserg260 wrote:

Phantasus is a web tool designed for visual and interactive gene expression analysis. In particular, it was designed to allow to go from a typical dataset to differential expression and downstream analysis in an easy and streamlined manner. For that aim, Phantasus integrates an intuitive heatmap interface with gene expression analysis tools from Bioconductor.

Main features:

  • Loading public datasets from Gene Expression Omnibus with both microarrays and RNA-seq datasets (via ARCHS4) being supported.
  • Publication ready plots with export to SVG: PCA plot, row profiles, box plots.
  • Clustering: k-means and hierarchical.
  • Gene set enrichment analysis via fgsea package.
  • Sharing session links.

enter image description here


ADD COMMENTlink modified 4 months ago • written 4 months ago by alserg260
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1758 users visited in the last hour