Regions of interest in IGV when aligning to the transcriptome

Question

[r.t.greenblatt]

Hi, I am wondering if there is a way to view regions of a gene in order to see different transcripts (of the same gene) in the same field of view. Since this alignment has been aligned to the transcriptome, I can't use the "regions of interest" track (since there are no coordinates). The best I have come up with is to add a "gene list", but this just splits the window.

I know I can map to to the genome, but I am looking for a creative solution for the current situation. Is there any way to manipulate the .bam file, maybe an R package?

Thanks!