Question: finding Topological Overlap Matrix(TOMType) value in TOMsimilarity() function in WGCNA
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gravatar for modarzi
4 months ago by
modarzi90
modarzi90 wrote:

Hi,

based on constructing Co-expression network by "signed hybrid" as a network type I need a guide for TOMsimilarity() function. In that function, one of the arguments is TOMType which specifying TOM type to be calculated. So, should be TOMType same as "Network Type"? I mean when I selected "signed hybrid" as a network type should I select the value of TOMType equal "signed"? I appreciate if anybody shares his/her comment with me about the value of "TOMType" in TOMsimilarity().

Best Regards,

Mohammad

tom wgcna • 165 views
ADD COMMENTlink modified 9 weeks ago by Biostar ♦♦ 20 • written 4 months ago by modarzi90
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