Database which lists all known bacteria to degrade common substrates e.g agar
1
0
Entering edit mode
4.8 years ago
davidtmscott ▴ 90

I am looking for a database which lists all bacterial genera/species known from the literature to degrade common substrates. E.g Known genera/species to poses enzyme to degrade agarose, chitin, alginate etc.

Thanks

gene enzyme bacteria • 661 views
ADD COMMENT
0
Entering edit mode

What makes you think such a highly specific database would exist?

ADD REPLY
2
Entering edit mode
4.8 years ago
GenoMax 141k

You may need to do some leg work here. There are multiple databases that list enzymes and degradative products. You can find a list here.

For example beta-agarase ( agarose 4-glycanohydrolase) , one of the enzymes that can degrade agar is found in this BRENDA search. You will see a list of organisms that have this enzyme if you scroll down the page.

ADD COMMENT

Login before adding your answer.

Traffic: 2089 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6