Entering edit mode
4.7 years ago
jystat
▴
10
Hi,
I have imputed data and renamed the integers allele to the letters by using the plink falg of "allele 1234".
However, I have noticed that there are 5 (insertion), 6 (deletion) or 7(allele from a reference panel) not changing to the letters.
Can anyone know how to delete this SNPs in plink or any other software?
Thank you.
Thank you for your help!